BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A08SP1|AL426139
(766 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1488 1030 0.0
3x_Contig662 196 7e-50
>3x_Contig1488
Length = 9807
Score = 1030 bits (516), Expect = 0.0
Identities = 540/550 (98%), Gaps = 2/550 (0%)
Strand = Plus / Minus
Query: 218 ttgacgtatttttatctgtmatttagaatctctactggccatgacattaattaagttaat 277
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 9807 ttgacgtatttttatctgtaatttagaatctctactggccatgacattaattaagttaat 9748
Query: 278 caaagacggatcagtttgttttattaagcgagcgagaattttttggtataccgttagttt 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9747 caaagacggatcagtttgttttattaagcgagcgagaattttttggtataccgttagttt 9688
Query: 338 catttgggagaacgtaga-tgcatcacattcctcagccagaaaggtataataggtaacag 396
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9687 catttgggagaacgtagaatgcatcacattcctcagccagaaaggtataataggtaacag 9628
Query: 397 atatactttcattatcctcaaaagtgttataatggaataaagaccaccaagtaagagcgt 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9627 atatactttcattatcctcaaaagtgttataatggaataaagaccaccaagtaagagcgt 9568
Query: 457 tcttacaagtcaaatattttgctattttgcmatagtaatggagataagtmacgttttctt 516
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 9567 tcttacaagtcaaatattttgctattttgcaatagtaatggagataagtaacgttttctt 9508
Query: 517 tcgcttttgataccaacagctgtmaaacgtgtgtttgaatccagtcagtgttcaagatct 576
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9507 tcgcttttgataccaacagctgtaaaacgtgtgtttgaatccagtcagtgttcaagatct 9448
Query: 577 ccaaactctcaacatatatgtctaayaattgagttgcctggtttaactttttatccgama 636
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 9447 ccaaactctcaacatatatgtctaataattgagttgcctggtttaactttttatccgaaa 9388
Query: 637 gcmacatattgtgaagaatcgattgacagcgacctaagtattgccaccctggatttactc 696
|| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 9387 gcaacatattgtgaagaatcgattga-aacgacctaagtattgccaccctggatttactc 9329
Query: 697 aagtgtggaaggatgtctttgagatttttccaaaagcttctccatactttgtttatggaa 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9328 aagtgtggaaggatgtctttgagatttttccaaaagcttctccatactttgtttatggaa 9269
Query: 757 ttcaacttgt 766
||||||||||
Sbjct: 9268 ttcaacttgt 9259
>3x_Contig662
Length = 2162
Score = 196 bits (98), Expect = 7e-50
Identities = 135/146 (92%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 1 gatctcaggtgtataaaaacaggatacagtctcacagtatcaatcattttgtaattcaaa 60
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 146 gatctcaggtgtatataaacaggttacagtctcacagtatcaatcattttgtaattcaaa 87
Query: 61 aacaagacaatatctttaataaattcatactcagcagaatcttgaaaatagacatctttc 120
|||||| ||||||||||| |||||||||||||||||| |||||| |||||| ||| |||
Sbjct: 86 aacaagccaatatctttactaaattcatactcagcagcatcttgcaaatagccat-tttt 28
Query: 121 aaatcgttaagaaaagcatggaataa 146
|||| |||||||||||||||| ||||
Sbjct: 27 aaattgttaagaaaagcatggcataa 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5995
Number of Sequences: 1807
Number of extensions: 5995
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 2
length of query: 766
length of database: 10,358,551
effective HSP length: 16
effective length of query: 750
effective length of database: 10,329,639
effective search space: 7747229250
effective search space used: 7747229250
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)